FlightsFrom San Juan

To Tokyo

Cheap Flights from San Juan to Tokyo

Browse current best options from San Juan. Become a member to unlock all deals and get alerts when new deals appear.

Deals from

San Juan

RatePunk searches hundreds of travel sites at once for deals on flights to Tokyo

Prices updated 24 days ago

486,190 searches this week

171 airlines compared

80%+ AI score for best value

Fares are subject to change and may not be available for all dates. (Data last updated May 29, 2026.)

Today’s best flight deals from San Juan to Tokyo

Explore current cheapest deals departing from San Juan to Tokyo

September 14 - September 30

Cheapest

SJU - Tokyo

$1,232

$1,144

Round trip

August 22 - August 28

SJU - Tokyo

$1,288

$1,191

Round trip

August 10 - August 23

SJU - Tokyo

$1,229

$1,199

Round trip

August 9 - August 16

Earliest

SJU - Tokyo

$1,255

$1,201

Round trip

October 15 - October 31

Best

SJU - Tokyo

$1,367

$1,202

Round trip

August 22 - August 31

SJU - Tokyo

$1,272

$1,211

Round trip

September 5 - September 12

SJU - Tokyo

$1,243

$1,216

Round trip

September 9 - September 23

SJU - Tokyo

$1,305

$1,225

Round trip

September 4 - September 12

SJU - Tokyo

$1,208

$1,244

Round trip

August 28 - August 31

SJU - Tokyo

$1,329

$1,245

Round trip

Unlock all 500+ flight deals to Tokyo and get alerts when great deals appear

Route Intelligence — 486,190 Searches this Week

Insights for flights from San Juan to Tokyo

Flights from San Juan to Tokyo cover a substantial distance of 13,425 km, classifying this as a long-haul journey. Right now, fares to Tokyo from San Juan are typically $1467–$2696, with a median of $1952. Current fares are above the typical level, and 0% of recent fares were classified as a good price. New deals appear almost daily, so setting a price alert can be beneficial for finding cheap flights from San Juan to Tokyo.
If you are looking for the cheapest time to fly from San Juan to Tokyo, the data indicates that April is typically the most affordable month, with a median fare of $1082. Following April, May also offers lower prices, with a median of $1318. September is another relatively cheaper option, showing a median fare of $1773.
Most itineraries for this route connect at least once, as 0% of recent fares were non-stop. For connecting itineraries, the typical number of stopovers is 4.
A typical journey from San Juan to Tokyo, including connections, takes approximately 65h 15m. This duration reflects the long-haul nature of the route and the multiple stopovers common for flights between these two cities.

How much is a round trip from San Juan to Tokyo

Regular price: $1,034 - $1,892

Prices for flights from San Juan to Tokyo are currently within the regular range.

The regular price range for flights from San Juan to Tokyo is $1034 to $1892. The current lowest deal is $1142 with Frontier Airlines, for travel from Sep 14-Sep 30.

now $1,142

Low $1,034

High $1,892

The cheapest time to fly from San Juan to Tokyo

The cheapest month to fly from San Juan to Tokyo is April, with a median price of $1082. The most expensive month is December, with a median price of $3311. Prices are generally lower from April to November.

April

Cheapest

Flights from $1,082

December

Most Expensive

Flights from $3,311

Jan
Feb
Mar
Apr
May
Jun
Jul
Aug
Sep
Oct
Nov
Dec

Direct flights from San Juan to Tokyo

Airline logo

Frontier Airlines

Airline logo

JetBlue Airways

Airline logo

United Airlines

Airline logo

Viva Macau

Last-minute flights going from San Juan to Tokyo

Mon, Jun 22

⌛ Last-Minute

SJU - Tokyo

Qatar Airways

San Juan (SJU) - Tokyo (NRT)

Qatar Airways

$1,528

$2,001

One-way

Mon, Jul 20

⌛ Last-Minute

SJU - Tokyo

Etihad Airways

San Juan (SJU) - Tokyo (NRT)

Etihad Airways

$1,357

$1,665

One-way

Wed, Jul 22

⌛ Last-Minute

SJU - Tokyo

JetBlue Airways

San Juan (SJU) - Tokyo (NRT)

JetBlue Airways

$1,337

$1,664

One-way

Sun, Jul 26

⌛ Last-Minute

SJU - Tokyo

Etihad Airways

San Juan (SJU) - Tokyo (NRT)

Etihad Airways

$1,376

$1,910

One-way

Tue, Jul 28

⌛ Last-Minute

SJU - Tokyo

Frontier AirlinesFrontier Airlines

San Juan (SJU) - Tokyo (NRT)

Frontier Airlines, Viva Macau

$1,319

$1,346

One-way

Tue, Jul 28

⌛ Last-Minute

SJU - Tokyo

Frontier AirlinesFrontier Airlines

San Juan (SJU) - Tokyo (NRT)

Frontier Airlines, Viva Macau

$1,326

$1,368

One-way

Biggest price drops on these dates for flights from San Juan to Tokyo

10 nights

Dec 1 - Dec 11

$1,605  →  $1,406

12%

9 nights

Dec 1 - Dec 10

$1,605  →  $1,412

12%

9 nights

Dec 1 - Dec 10

$1,601  →  $1,412

12%

13 nights

Oct 6 - Oct 19

$1,436  →  $1,251

13%

Popular Airports to fly from San Juan to Tokyo

San Juan - Tokyo route insights

💸 Price insights

Recent fares are above the typical level

Recent fares from San Juan to Tokyo are above the typical level for this route.

📅 Best time to fly

April is historically the cheapest month to fly

Historically, April is the cheapest month to fly from San Juan to Tokyo, with a median price of $1082.

⏱️ Flight duration

Expect a long-haul flight of 65h 15m

Flights from San Juan to Tokyo are long-haul, typically lasting 65h 15m with multiple stopovers.

✈️ Airlines & availability

Connecting flights are dominant for this route

This route is connecting-dominant, with a median of 4 stopovers when not flying direct.

🏆 Airline highlight

Frontier Airlines offers deals on this route

Frontier Airlines has historically offered deals for flights from San Juan to Tokyo.

🎯 Booking tip

Deals appear frequently for this route

Historically, deals for flights from San Juan to Tokyo appear frequently, about once per day.

San Juan main airports to depart from

Luis Muñoz Marín International (SJU)

Cheapest

Luis Muñoz Marín International is a primary departure point for flights from San Juan to Tokyo.

📍 ~10 km from San Juan (reachable by car)

💸 Flights from ~$1142

Fernando Luis Ribas Dominicci (SIG)

Fernando Luis Ribas Dominicci offers an alternative departure option for your journey to Tokyo.

📍 ~2 km from San Juan (reachable by car)

💸 Flights from ~$1142

Tokyo main airports to arrive at

Narita International (NRT)

Cheapest

Narita International Airport is a good option for flights to Tokyo, often offering competitive prices.

📍 ~60 km from Tokyo (reachable by train or bus)

💸 Flights from ~$1035

Haneda (HND)

Haneda Airport provides another arrival choice for flights from San Juan to Tokyo.

📍 ~15 km from Tokyo (reachable by train or bus)

💸 Flights from ~$1344

Airports nearby Tokyo used as alternative

Ibaraki (IBR)

Ibaraki (IBR) is a useful alternative for Tokyo, especially for low-cost carriers and domestic routes.

📍 ~75 km from Tokyo (reachable by bus)

💸 Flights from ~$1969

Shizuoka (FSZ)

Shizuoka (FSZ) is a good alternative for travelers heading to western Tokyo or Kanagawa.

📍 ~155 km from Tokyo (reachable by train and bus)

💸 Flights from ~$1604

Sendai (SDJ)

Sendai (SDJ) is a major regional hub with high reliability and many domestic connections.

📍 ~300 km from Tokyo (reachable by train)

💸 Flights from ~$1530

Chubu Centrair International (NGO)

Cheapest

Chubu Centrair International (NGO) is a major international gateway with extensive flight options.

📍 ~270 km from Tokyo (reachable by train)

💸 Flights from ~$1315

Fukushima (FKS)

Fukushima (FKS) is relatively close geographically and accessible via the Tohoku Shinkansen corridor.

📍 ~180 km from Tokyo (reachable by train)

💸 Flights from ~$1856

Business & First Class Flight Deals to Tokyo

Discover luxury on the budget with premium cabin class on flights from San Juan to Tokyo.

Elite

Best Elite deals to Tokyo

Exclusive daily First Class, Business Class, and Premium Economy flight deals, refreshed every 24 hours.

From SJU

Elite

Jul 21

Tokyo, Japan

93% AI deal score

$10,308

$5,745

Save $4,563

From SJU

Elite

Jul 31

Tokyo, Japan

93% AI deal score

$10,317

$5,751

Save $4,566

From SJU

Elite

Aug 25

Tokyo, Japan

92% AI deal score

$8,808

$5,691

Save $3,117

From SJU

Elite

Jul 31

Tokyo, Japan

92% AI deal score

$9,924

$5,751

Save $4,173

From SJU

Elite

Aug 05

Tokyo, Japan

92% AI deal score

$8,870

$5,796

Save $3,074

From SJU

Elite

Sep 02

Tokyo, Japan

92% AI deal score

$9,231

$5,818

Save $3,413

From SJU

Elite

Sep 06

Tokyo, Japan

92% AI deal score

$9,105

$5,956

Save $3,149

From SJU

Elite

Aug 01

Tokyo, Japan

91% AI deal score

$8,516

$5,606

Save $2,910

From SJU

Elite

Aug 01

Tokyo, Japan

91% AI deal score

$8,184

$5,606

Save $2,578

From SJU

Elite

Aug 01

Tokyo, Japan

91% AI deal score

$8,409

$5,606

Save $2,803

From SJU

Elite

Aug 01

Tokyo, Japan

91% AI deal score

$8,465

$5,677

Save $2,788

From SJU

Elite

Aug 23

Tokyo, Japan

91% AI deal score

$8,594

$5,691

Save $2,903

From SJU

Elite

Aug 23

Tokyo, Japan

91% AI deal score

$8,549

$5,717

Save $2,832

From SJU

Elite

Aug 25

Tokyo, Japan

91% AI deal score

$8,609

$5,717

Save $2,892

From SJU

Elite

Aug 01

Tokyo, Japan

91% AI deal score

$8,332

$5,718

Save $2,614

From SJU

Elite

Aug 12

Tokyo, Japan

91% AI deal score

$8,435

$5,733

Save $2,702

From SJU

Elite

Aug 12

Tokyo, Japan

91% AI deal score

$8,285

$5,759

Save $2,526

From SJU

Elite

Aug 27

Tokyo, Japan

91% AI deal score

$8,654

$5,763

Save $2,891

From SJU

Elite

Aug 08

Tokyo, Japan

91% AI deal score

$8,327

$5,772

Save $2,555

From SJU

Elite

Aug 05

Tokyo, Japan

91% AI deal score

$8,228

$5,796

Save $2,432

From SJU

Elite

Aug 11

Tokyo, Japan

91% AI deal score

$8,285

$5,808

Save $2,477

From SJU

Elite

Sep 02

Tokyo, Japan

91% AI deal score

$9,091

$5,954

Save $3,137

From SJU

Elite

Dec 10

Tokyo, Japan

91% AI deal score

$9,724

$6,525

Save $3,199

From SJU

Elite

Aug 12

Tokyo, Japan

90% AI deal score

$8,285

$5,894

Save $2,391

From SJU

Elite

Aug 09

Tokyo, Japan

90% AI deal score

$8,228

$5,907

Save $2,321

From SJU

Elite

Nov 25

Tokyo, Japan

90% AI deal score

$9,214

$6,498

Save $2,716

From SJU

Elite

Nov 18

Tokyo, Japan

90% AI deal score

$9,241

$6,505

Save $2,736

From SJU

Elite

Nov 02

Tokyo, Japan

90% AI deal score

$3,130

$2,603

Save $527

From SJU

Elite

Nov 01

Tokyo, Japan

89% AI deal score

$3,130

$2,646

Save $484

From SJU

Elite

Nov 01

Tokyo, Japan

89% AI deal score

$3,130

$2,650

Save $480

From SJU

Elite

Aug 21

Tokyo, Japan

83% AI deal score

$8,879

$6,905

Save $1,974

From SJU

Elite

Oct 27

Tokyo, Japan

82% AI deal score

$2,917

$2,597

Save $320

From SJU

Elite

Nov 01

Tokyo, Japan

82% AI deal score

$2,999

$2,715

Save $284

From SJU

Elite

Jul 08

Tokyo, Japan

80% AI deal score

$28,971

$26,643

Save $2,328

From SJU

Elite

Jul 14

Tokyo, Japan

80% AI deal score

$3,132

$2,939

Save $193

From SJU

Elite

Nov 15

Tokyo, Japan

76% AI deal score

$9,252

$9,163

Save $89

From SJU

Elite

Oct 14

Tokyo, Japan

76% AI deal score

$3,952

From SJU

Elite

Aug 23

Tokyo, Japan

75% AI deal score

$9,175

From SJU

Elite

Oct 10

Tokyo, Japan

75% AI deal score

$4,053

From SJU

Elite

Jul 20

Tokyo, Japan

75% AI deal score

$4,150

From SJU

Elite

Oct 27

Tokyo, Japan

75% AI deal score

$4,282

From SJU

Elite

Sep 21

Tokyo, Japan

75% AI deal score

$4,355

From SJU

Elite

Jul 15

Tokyo, Japan

74% AI deal score

$4,001

From SJU

Elite

Oct 11

Tokyo, Japan

74% AI deal score

$4,288

From SJU

Elite

Nov 15

Tokyo, Japan

74% AI deal score

$4,330

From SJU

Elite

Sep 21

Tokyo, Japan

74% AI deal score

$4,353

From SJU

Elite

Jul 15

Tokyo, Japan

74% AI deal score

$4,654

From SJU

Elite

Jul 20

Tokyo, Japan

73% AI deal score

$4,190

From SJU

Elite

Nov 30

Tokyo, Japan

73% AI deal score

$4,722

From SJU

Elite

Nov 18

Tokyo, Japan

73% AI deal score

$4,726

From SJU

Elite

Nov 17

Tokyo, Japan

73% AI deal score

$4,728

From SJU

Elite

Oct 13

Tokyo, Japan

73% AI deal score

$4,919

From SJU

Elite

Nov 01

Tokyo, Japan

72% AI deal score

$11,318

From SJU

Elite

Jul 19

Tokyo, Japan

72% AI deal score

$4,429

From SJU

Elite

Nov 07

Tokyo, Japan

70% AI deal score

$4,782

From SJU

Elite

Nov 10

Tokyo, Japan

70% AI deal score

$7,074

From SJU

Elite

Nov 09

Tokyo, Japan

70% AI deal score

$7,081

From SJU

Elite

Nov 30

Tokyo, Japan

69% AI deal score

$17,902

From SJU

Elite

Aug 15

Tokyo, Japan

69% AI deal score

$18,448

From SJU

Elite

Jul 11

Tokyo, Japan

69% AI deal score

$61,303

From SJU

Elite

Jul 10

Tokyo, Japan

69% AI deal score

$61,412

From SJU

Elite

Aug 18

Tokyo, Japan

69% AI deal score

$61,415

From SJU

Elite

Aug 24

Tokyo, Japan

69% AI deal score

$61,415

From SJU

Elite

Jul 03

Tokyo, Japan

69% AI deal score

$61,462

From SJU

Elite

Aug 28

Tokyo, Japan

69% AI deal score

$61,462

From SJU

Elite

Jun 23

Tokyo, Japan

69% AI deal score

$61,612

From SJU

Elite

Jun 29

Tokyo, Japan

69% AI deal score

$61,662

From SJU

Elite

Jul 11

Tokyo, Japan

69% AI deal score

$61,912

From SJU

Elite

Jul 11

Tokyo, Japan

69% AI deal score

$61,912

From SJU

Elite

Jul 11

Tokyo, Japan

69% AI deal score

$61,912

From SJU

Elite

Aug 08

Tokyo, Japan

69% AI deal score

$61,919

From SJU

Elite

Aug 17

Tokyo, Japan

69% AI deal score

$61,969

From SJU

Elite

Aug 03

Tokyo, Japan

69% AI deal score

$61,969

From SJU

Elite

Jul 10

Tokyo, Japan

69% AI deal score

$62,021

From SJU

Elite

Jul 10

Tokyo, Japan

69% AI deal score

$62,021

From SJU

Elite

Jul 10

Tokyo, Japan

69% AI deal score

$62,021

From SJU

Elite

Aug 24

Tokyo, Japan

69% AI deal score

$62,024

From SJU

Elite

Aug 18

Tokyo, Japan

69% AI deal score

$62,024

From SJU

Elite

Aug 20

Tokyo, Japan

69% AI deal score

$62,026

From SJU

Elite

Jul 09

Tokyo, Japan

69% AI deal score

$62,026

From SJU

Elite

Aug 22

Tokyo, Japan

69% AI deal score

$62,030

From SJU

Elite

Aug 16

Tokyo, Japan

69% AI deal score

$62,030

From SJU

Elite

Aug 23

Tokyo, Japan

69% AI deal score

$62,030

From SJU

Elite

Aug 15

Tokyo, Japan

69% AI deal score

$62,030

From SJU

Elite

Aug 28

Tokyo, Japan

69% AI deal score

$62,071

From SJU

Elite

Jul 03

Tokyo, Japan

69% AI deal score

$62,071

From SJU

Elite

Aug 25

Tokyo, Japan

69% AI deal score

$62,101

From SJU

Elite

Aug 27

Tokyo, Japan

69% AI deal score

$62,137

From SJU

Elite

Jun 23

Tokyo, Japan

69% AI deal score

$62,221

From SJU

Elite

Jun 29

Tokyo, Japan

69% AI deal score

$62,271

From SJU

Elite

Jul 17

Tokyo, Japan

69% AI deal score

$62,455

From SJU

Elite

Aug 17

Tokyo, Japan

69% AI deal score

$62,578

From SJU

Elite

Jul 22

Tokyo, Japan

69% AI deal score

$62,578

From SJU

Elite

Jul 22

Tokyo, Japan

69% AI deal score

$62,578

From SJU

Elite

Jul 30

Tokyo, Japan

69% AI deal score

$62,635

From SJU

Elite

Aug 20

Tokyo, Japan

69% AI deal score

$62,635

From SJU

Elite

Jul 09

Tokyo, Japan

69% AI deal score

$62,635

From SJU

Elite

Jul 30

Tokyo, Japan

69% AI deal score

$62,635

From SJU

Elite

Jul 09

Tokyo, Japan

69% AI deal score

$62,635

From SJU

Elite

Jul 09

Tokyo, Japan

69% AI deal score

$62,635

Frequently Asked Questions About Flights to Tokyo

Finding affordable flights often involves comparing prices across various airlines and booking sites. Being flexible with your travel dates and considering different airports can also help uncover better deals. Setting up price alerts may notify you when fares drop.

Booking flights in advance, often several months out, can sometimes lead to lower prices. However, last-minute deals can occasionally appear, though they are less common for international routes. Monitoring price trends can help you decide the optimal booking time.

Yes, comparing nearby airports at both your origin and destination can sometimes reveal more economical flight options. While it may require additional ground transportation, the savings on airfare can be significant. Always factor in the total cost and travel time.