Are direct flights from San Juan to Panama City always the best option?

Direct flights offer convenience and save travel time, but they are not always the most budget-friendly choice. Flights with layovers can often be more affordable, depending on the route and airline. Consider your priorities for cost versus travel duration.

Can flexible travel dates help on San Juan to Panama City flights?

Yes, being flexible with your travel dates can significantly impact flight prices. Mid-week travel or flying during off-peak seasons often results in lower fares. Adjusting your departure or return by a few days may unlock better deals.

What extra costs should I check before booking San Juan to Panama City flights?

Before booking, always check for potential extra costs such as baggage fees, seat selection charges, and in-flight services. Some airlines may also charge for printing boarding passes at the airport. Understanding these fees helps you calculate the true total cost of your trip.

Flights From San Juan

To Panama City

Cheap Flights from San Juan to Panama City

Browse current best options from San Juan. Become a member to unlock all deals and get alerts when new deals appear.

Deals from

San Juan

RatePunk searches hundreds of travel sites at once for deals on flights to Panama City

Prices updated 7 days ago

483 airlines compared

80%+ AI score for best value

Fares are subject to change and may not be available for all dates. (Data last updated Oct 26, 2026.)

Today’s best flight deals from San Juan to Panama City

Explore current cheapest deals departing from San Juan to Panama City

2026-11-12 – 2026-11-14
SJU - Panama City
32% AI deal score
$384
$1,185
Round trip
2026-12-17 – 2027-01-06
SJU - Panama City
33% AI deal score
$320
$1,230
Round trip
2026-11-10 – 2026-11-14
SJU - Panama City
32% AI deal score
$392
$1,270
Round trip
2026-12-18 – 2027-01-06
SJU - Panama City
33% AI deal score
$325
$1,338
Round trip
2026-12-17 – 2027-01-04
SJU - Panama City
32% AI deal score
$325
$1,370
Round trip
2026-11-07 – 2026-11-14
SJU - Panama City
33% AI deal score
$385
$1,383
Round trip
2026-11-11 – 2026-11-14
SJU - Panama City
34% AI deal score
$388
$1,390
Round trip
2026-11-09 – 2026-11-14
SJU - Panama City
32% AI deal score
$379
$1,390
Round trip
2026-11-13 – 2026-11-14
SJU - Panama City
32% AI deal score
$383
$1,397
Round trip
2026-11-08 – 2026-11-14
SJU - Panama City
32% AI deal score
$378
$1,451
Round trip

San Juan to Panama City: Overview

Insights for flights from San Juan to Panama City

The journey from San Juan to Panama City covers a distance of 2,397 kilometers, classifying it as a medium-haul flight. This distance typically translates into longer travel times, often involving connections, which is a common characteristic for routes of this length.

For travelers seeking cheap flights from San Juan to Panama City, fares typically range from $288–$414, with a median of $322. Right now, fares are significantly below the typical level, indicating a favorable time to consider booking. Deals for this route are currently infrequent, suggesting that setting a price alert could be beneficial to catch the best offers.

When considering the cheapest time to fly from San Juan to Panama City, November stands out as the most affordable month, with a median fare of $253. Following November, June offers a median fare of $322, while September has a higher median of $506. These seasonal variations can significantly impact the overall cost of your trip.

Regarding direct flights from San Juan to Panama City, most itineraries connect at least once, as 0% of recent fares were non-stop. When connections are involved, the typical number of stopovers is one. This means you should expect to make at least one stop on your journey.

A typical journey from San Juan to Panama City, including connections, takes approximately 12 hours and 12 minutes. Given that most itineraries involve at least one stopover, this duration reflects the combined time spent flying and waiting during transfers.

How much is a round trip from San Juan to Panama City

Regular price: $357 - $565

Prices for flights from San Juan to Panama City are currently above the regular range.

The regular price range for this route is typically between $357 and $565. The current lowest deal is $906 with United Airlines, for travel from Nov 5-Nov 8.

now $906

Low $357

High $565

The cheapest time to fly from San Juan to Panama City

The cheapest month to fly from San Juan to Panama City is February, with a median price of $572. The most expensive month is November, with a median price of $1167. Prices are generally lower from January to December.

February

Cheapest

Flights from $572

November

Most Expensive

Flights from $1,167

Jan

Feb

Mar

Oct

Nov

Dec

Direct flights from San Juan to Panama City

WestJet

Frontier Airlines

Porter Airlines

Air Canada

Last-minute flights going from San Juan to Panama City

Thu, Nov 5

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

American Airlines

$435

$894

One-way

Fri, Nov 6

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

Frontier Airlines, Flair Airlines, WestJet

$373

$1,346

One-way

Sat, Nov 7

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

JetBlue Airways, Flair Airlines, WestJet

$385

$1,345

One-way

Mon, Nov 9

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

Frontier Airlines, Air Canada, WestJet

$379

$1,356

One-way

Thu, Nov 12

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

Maersk Air, WestJet

$384

$1,184

One-way

Thu, Nov 12

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

Maersk Air, WestJet

$355

$1,393

One-way

Biggest price drops on these dates for flights from San Juan to Panama City

3 nights

Nov 5 - Nov 8

$435 → $894

106%

2 nights

Nov 12 - Nov 14

$384 → $1,184

208%

7 nights

Nov 7 - Nov 14

$385 → $1,345

249%

8 nights

Nov 6 - Nov 14

$373 → $1,346

261%

Popular Airports to fly from San Juan to Panama City

San Juan - Panama City route insights

💸 Price insights

Recent fares are below the typical level

Recent fares from San Juan to Panama City are below the typical level for this route.

📅 Best time to fly

November is historically cheapest

Historically, November is the cheapest month to fly from San Juan to Panama City, with a median price of $253.

⏱️ Flight duration

Typically 12h 12m with stopovers

Flights from San Juan to Panama City typically take 12h 12m, with 1 stopover being common.

✈️ Airlines & availability

Connecting flights only

There are no direct flights available; all flights include at least one stopover.

🏆 Airline highlight

United Airlines offers deals

United Airlines has offered 22 deals on this route, making it a frequent option for travelers.

🎯 Booking tip

Deals are rare

Deals on flights from San Juan to Panama City are rare, so consider booking when you see a good price.

San Juan main airports to depart from

Luis Muñoz Marín International (SJU)

Cheapest

Luis Muñoz Marín International Airport (SJU) is a good option for flights from San Juan to Panama City.

📍 ~11 km from San Juan (reachable by car)

💸 Flights from ~$526

Panama City main airports to arrive at

Northwest Florida Beaches International (ECP)

Cheapest

Northwest Florida Beaches International Airport is a convenient arrival choice for Panama City.

📍 ~26 km from Panama City (reachable by car)

💸 Flights from ~$466

Airports nearby Panama City used as alternative

Destin–Fort Walton Beach (VPS)

Destin–Fort Walton Beach is a useful alternative, serving the same coastal region with similar airline carriers.

📍 ~90 km from Panama City (traffic can be heavy during peak tourist seasons).

💸 Flights from ~$305

Business & First Class Flight Deals to Panama City

49% AI deal score

$1,407

United Airlines

Business Class

From SJU

Elite

Nov 09

Panama, Panama

48% AI deal score

$1,340

$1,241

Save $99

From SJU

Elite

Nov 19

Panama City, United States

45% AI deal score

$1,601

United Airlines

Business Class

From SJU

Elite

Nov 18

Panama City, United States

45% AI deal score

$1,707

United Airlines

Business Class

From SJU

Elite

Oct 23

Panama City, United States

45% AI deal score

$1,908

United Airlines

Business Class

From SJU

Elite

Nov 17

Panama City, United States

44% AI deal score

$1,833

United Airlines

Business Class

Frequently Asked Questions About Flights to Panama City

To find more affordable flights, consider being flexible with your travel dates and times. Using flight comparison sites can help you compare various options. Looking into different airlines and potential layovers may also reveal better deals.

Booking flights in advance often provides more competitive prices, though last-minute deals can sometimes appear. Monitoring price trends for your desired travel period may help you decide the optimal booking time. Prices can fluctuate, so regular checking is advisable.

Comparing nearby airports can sometimes lead to more affordable flight options or different schedules. While it may add to ground transportation time, the potential savings could be significant. Always factor in the total cost and convenience when considering alternative airports.

Related routes

More routes from San Juan

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Flights to Panama City from other cities

Flights from Amsterdam to Panama City Flights from Frankfurt to Panama City Flights from Guayaquil to Panama City Flights from Hong Kong to Panama City Flights from Medellín to Panama City Flights from Munich to Panama City Flights from Paris to Panama City Flights from Quito to Panama City Flights from Rome to Panama City Flights from San Miguel de Tucumán to Panama City Flights from Santiago de Chile to Panama City

San Juan to Panama City: Overview

Insights for flights from San Juan to Panama City

How much is a round trip from San Juan to Panama City

Regular price: $357 - $565

Prices for flights from San Juan to Panama City are currently above the regular range.

The regular price range for this route is typically between $357 and $565. The current lowest deal is $906 with United Airlines, for travel from Nov 5-Nov 8.

now $906

Low $357

High $565

The cheapest time to fly from San Juan to Panama City

February

Cheapest

Flights from $572

November

Most Expensive

Flights from $1,167

Jan

Feb

Mar

Oct

Nov

Dec

Direct flights from San Juan to Panama City

WestJet

Frontier Airlines

Porter Airlines

Air Canada

Last-minute flights going from San Juan to Panama City

Thu, Nov 5

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

American Airlines

$435

$894

One-way

Fri, Nov 6

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

Frontier Airlines, Flair Airlines, WestJet

$373

$1,346

One-way

Sat, Nov 7

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

JetBlue Airways, Flair Airlines, WestJet

$385

$1,345

One-way

Mon, Nov 9

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

Frontier Airlines, Air Canada, WestJet

$379

$1,356

One-way

Thu, Nov 12

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

Maersk Air, WestJet

$384

$1,184

One-way

Thu, Nov 12

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

Maersk Air, WestJet

$355

$1,393

One-way

Biggest price drops on these dates for flights from San Juan to Panama City

3 nights

Nov 5 - Nov 8

$435 → $894

106%

2 nights

Nov 12 - Nov 14

$384 → $1,184

208%

7 nights

Nov 7 - Nov 14

$385 → $1,345

249%

8 nights

Nov 6 - Nov 14

$373 → $1,346

261%

Popular Airports to fly from San Juan to Panama City