Are direct flights from San Juan to Panama City always the best option?

Direct flights offer convenience and save time, but they are not always the cheapest option. Flights with one or more layovers can sometimes be significantly more affordable. Consider your budget and time constraints when deciding between direct and connecting flights.

Can flexible travel dates help on San Juan to Panama City flights?

Absolutely, being flexible with your travel dates can significantly impact the price of your flight. Mid-week flights or those during off-peak seasons often have lower fares than weekend or holiday travel. Adjusting your departure or return by a few days may lead to considerable savings.

What extra costs should I check before booking San Juan to Panama City flights?

Before booking, always check for potential extra costs such as baggage fees, seat selection charges, and in-flight services. Some airlines may also charge for printing boarding passes at the airport. Understanding these additional fees can help you calculate the total cost of your trip accurately.

Flights From San Juan

To Panama City

Cheap Flights from San Juan to Panama City

Browse current best options from San Juan. Become a member to unlock all deals and get alerts when new deals appear.

Deals from

San Juan

RatePunk searches hundreds of travel sites at once for deals on flights to Panama City

Prices updated 2 days ago

405 airlines compared

80%+ AI score for best value

Fares are subject to change and may not be available for all dates. (Data last updated Jul 26, 2026.)

Today’s best flight deals from San Juan to Panama City

Explore current cheapest deals departing from San Juan to Panama City

2026-11-06 – 2026-11-10
SJU - Panama City
65% AI deal score
$399
$491
Round trip
2026-09-21 – 2026-09-28
SJU - Panama City
48% AI deal score
$355
$491
Round trip
2026-11-06 – 2026-11-13
SJU - Panama City
65% AI deal score
$393
$491
Round trip
2026-08-05 – 2026-08-11
SJU - Panama
40% AI deal score
$425
$506
Round trip
2026-08-07 – 2026-08-15
SJU - Panama
40% AI deal score
$278
$506
Round trip
2026-08-07 – 2026-08-17
SJU - Panama
40% AI deal score
$268
$506
Round trip
2026-08-08 – 2026-08-11
SJU - Panama
42% AI deal score
$452
$506
Round trip
2026-08-11 – 2026-08-17
SJU - Panama
39% AI deal score
$293
$506
Round trip
2026-08-12 – 2026-08-18
SJU - Panama
39% AI deal score
$291
$506
Round trip
2026-08-12 – 2026-08-19
SJU - Panama
40% AI deal score
$290
$506
Round trip

San Juan to Panama City: Overview

How much is a round trip from San Juan to Panama City

Regular price: $296 - $513

Prices for flights from San Juan to Panama City are currently within the regular range.

The regular price range for flights from San Juan to Panama City is between $296 and $513. The current lowest deal is $490 with United Airlines for travel from Sep 21-Sep 28.

now $490

Low $296

High $513

The cheapest time to fly from San Juan to Panama City

The cheapest month to fly from San Juan to Panama City is November, with a median price of $253. The most expensive month is April, with a median price of $551. Prices are generally lower from June to November.

November

Cheapest

Flights from $253

April

Most Expensive

Flights from $551

Apr

Jun

Sep

Nov

Direct flights from San Juan to Panama City

United Airlines

Deutsche Luft Hansa

Southwest Airlines

Last-minute flights going from San Juan to Panama City

Sun, Jul 26

⌛ Last-Minute

SJU - Panama

San Juan (SJU) - Panama (PTY)

$829

$914

One-way

Mon, Jul 27

⌛ Last-Minute

SJU - Panama

San Juan (SJU) - Panama (PTY)

$849

$759

One-way

Tue, Jul 28

⌛ Last-Minute

SJU - Panama

San Juan (SJU) - Panama (PTY)

$860

$755

One-way

Wed, Jul 29

⌛ Last-Minute

SJU - Panama

San Juan (SJU) - Panama (PTY)

$703

$880

One-way

Wed, Jul 29

⌛ Last-Minute

SJU - Panama

San Juan (SJU) - Panama (PTY)

$658

$880

One-way

Thu, Jul 30

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

United Airlines

$446

$812

One-way

Biggest price drops on these dates for flights from San Juan to Panama City

6 nights

Jul 28 - Aug 3

$860 → $755

12%

7 nights

Jul 27 - Aug 3

$849 → $759

11%

7 nights

Jan 27 - Feb 3

$500 → $506

6 nights

Jan 28 - Feb 3

$499 → $506

Popular Airports to fly from San Juan to Panama City

San Juan - Panama City route insights

💸 Price insights

Recent fares are below the typical level.

Recent fares from San Juan to Panama City are below the typical level of $322.

📅 Best time to fly

November is historically the cheapest month to fly.

Historically, November is the cheapest month to fly from San Juan to Panama City, with a median price of $253.

⏱️ Flight duration

Flights typically take 12h 12m.

Flights from San Juan to Panama City typically take 12h 12m, with 1 stopover being common.

✈️ Airlines & availability

Connecting flights are dominant for this route.

Connecting flights are dominant for this route, with no direct flights available in the last 90 days.

🏆 Airline highlight

United Airlines offers deals on connecting flights.

United Airlines has offered 22 connecting flight deals from San Juan to Panama City recently.

🎯 Booking tip

Deals for this route are rare.

Deals for flights from San Juan to Panama City are rare, appearing infrequently over the last 30 days.

San Juan main airports to depart from

Luis Muñoz Marín International (SJU)

Cheapest

Fly from SJU for direct and connecting flights to Panama City, offering a good balance of price and convenience.

📍 ~10 km from San Juan (reachable by car)

💸 Flights from ~$445

Panama City main airports to arrive at

Northwest Florida Beaches International (ECP)

Cheapest

Northwest Florida Beaches International Airport is an arrival option for Panama City.

📍 ~27 km from Panama City (reachable by car)

💸 Flights from ~$421

Airports nearby Panama City used as alternative

Destin–Fort Walton Beach (VPS)

Destin–Fort Walton Beach Airport can be a useful alternative arrival airport for its proximity to Panama City.

📍 ~95 km from Panama City (traffic on Highway 98 can significantly impact travel time).

💸 Flights from ~$299

Business & First Class Flight Deals to Panama City

67% AI deal score

$1,398

From SJU

Elite

Aug 03

Panama, Panama

66% AI deal score

$1,353

$1,106

Save $247

From SJU

Elite

Jul 16

Panama, Panama

47% AI deal score

$1,501

$1,460

Save $41

Frequently Asked Questions About Flights to Panama City

To find more affordable flights, consider being flexible with your travel dates and times. Comparing prices across different airlines and booking sites can also help you discover better deals. Looking into flights with layovers may sometimes offer lower fares than direct routes.

Booking flights in advance, often several weeks or months before your intended departure, can sometimes result in lower prices. Prices may fluctuate, so monitoring fares over time can help you identify a good booking window. Weekday bookings might also offer different pricing compared to weekends.

Yes, comparing flights to and from nearby airports can often provide more options and potentially lower prices. Sometimes, flying into or out of a smaller airport a short distance away can be more economical. Always factor in the additional travel time and cost to reach these alternative airports.

Related routes

More routes from San Juan

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Flights to Panama City from other cities

Flights from Amsterdam to Panama City Flights from Barcelona to Panama City Flights from Bogotá to Panama City Flights from Frankfurt to Panama City Flights from Guayaquil to Panama City Flights from Hong Kong to Panama City Flights from Lisbon to Panama City Flights from Madrid to Panama City Flights from Medellín to Panama City Flights from Munich to Panama City Flights from Quito to Panama City Flights from San Miguel de Tucumán to Panama City

San Juan to Panama City: Overview

How much is a round trip from San Juan to Panama City

Regular price: $296 - $513

Prices for flights from San Juan to Panama City are currently within the regular range.

The regular price range for flights from San Juan to Panama City is between $296 and $513. The current lowest deal is $490 with United Airlines for travel from Sep 21-Sep 28.

now $490

Low $296

High $513

The cheapest time to fly from San Juan to Panama City

November

Cheapest

Flights from $253

April

Most Expensive

Flights from $551

Apr

Jun

Sep

Nov

Direct flights from San Juan to Panama City

United Airlines

Deutsche Luft Hansa

Southwest Airlines

Last-minute flights going from San Juan to Panama City

Sun, Jul 26

⌛ Last-Minute

SJU - Panama

San Juan (SJU) - Panama (PTY)

$829

$914

One-way

Mon, Jul 27

⌛ Last-Minute

SJU - Panama

San Juan (SJU) - Panama (PTY)

$849

$759

One-way

Tue, Jul 28

⌛ Last-Minute

SJU - Panama

San Juan (SJU) - Panama (PTY)

$860

$755

One-way

Wed, Jul 29

⌛ Last-Minute

SJU - Panama

San Juan (SJU) - Panama (PTY)

$703

$880

One-way

Wed, Jul 29

⌛ Last-Minute

SJU - Panama

San Juan (SJU) - Panama (PTY)

$658

$880

One-way

Thu, Jul 30

⌛ Last-Minute

SJU - Panama City

San Juan (SJU) - Panama City (ECP)

United Airlines

$446

$812

One-way

Biggest price drops on these dates for flights from San Juan to Panama City

6 nights

Jul 28 - Aug 3

$860 → $755

12%

7 nights

Jul 27 - Aug 3

$849 → $759

11%

7 nights

Jan 27 - Feb 3

$500 → $506

6 nights

Jan 28 - Feb 3

$499 → $506

Popular Airports to fly from San Juan to Panama City